IL_5ZEP_198
3D structure
- PDB id
- 5ZEP (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- M. smegmatis hibernating state 70S ribosome structure
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.4 Å
Loop
- Sequence
- UUACG*CCGAA
- Length
- 10 nucleotides
- Bulged bases
- None detected
- QA status
- Unknown status
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_5ZEP_198 not in the Motif Atlas
- Geometric match to IL_7VYX_004
- Geometric discrepancy: 0.3822
- The information below is about IL_7VYX_004
- Detailed Annotation
- Partly complementary
- Broad Annotation
- Partly complementary
- Motif group
- IL_71154.3
- Basepair signature
- cWW-cWW-cWW-cWW-cWW
- Number of instances in this motif group
- 17
Unit IDs
5ZEP|1|B|U|2
5ZEP|1|B|U|3
5ZEP|1|B|A|4
5ZEP|1|B|C|5
5ZEP|1|B|G|6
*
5ZEP|1|B|C|111
5ZEP|1|B|C|112
5ZEP|1|B|G|113
5ZEP|1|B|A|114
5ZEP|1|B|A|115
Current chains
- Chain B
- 5S rRNA
Nearby chains
- Chain P
- 50S ribosomal protein L18
Coloring options: