IL_5ZET_111
3D structure
- PDB id
- 5ZET (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- M. smegmatis P/P state 50S ribosomal subunit
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.2 Å
Loop
- Sequence
- UAUAC*GAUAG
- Length
- 10 nucleotides
- Bulged bases
- 5ZET|1|A|U|2913, 5ZET|1|A|A|2914
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_5ZET_111 not in the Motif Atlas
- Homologous match to IL_4WF9_102
- Geometric discrepancy: 0.2434
- The information below is about IL_4WF9_102
- Detailed Annotation
- UAA/GAN related, with intercalation
- Broad Annotation
- UAA/GAN related, with intercalation
- Motif group
- IL_82016.1
- Basepair signature
- cWW-L-tHS-L-cWW
- Number of instances in this motif group
- 4
Unit IDs
5ZET|1|A|U|2911
5ZET|1|A|A|2912
5ZET|1|A|U|2913
5ZET|1|A|A|2914
5ZET|1|A|C|2915
*
5ZET|1|A|G|2942
5ZET|1|A|A|2943
5ZET|1|A|U|2944
5ZET|1|A|A|2945
5ZET|1|A|G|2946
Current chains
- Chain A
- 23S rRNA
Nearby chains
- Chain D
- 50S ribosomal protein L3
- Chain O
- 50S ribosomal protein L17
- Chain Q
- 50S ribosomal protein L19
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