IL_5ZEU_020

3D structure

PDB id

5ZEU (explore in PDB, NAKB, or RNA 3D Hub)

Description

M. smegmatis P/P state 30S ribosomal subunit

Experimental method

ELECTRON MICROSCOPY

Resolution

3.7 Å

Loop

Sequence

CAG*CAGAAG

Length

9 nucleotides

Bulged bases

None detected

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_5ZEU_020 not in the Motif Atlas

Homologous match to IL_5J7L_021

Geometric discrepancy: 0.1673

The information below is about IL_5J7L_021

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

IL_33323.1

Basepair signature

cWW-L-R-L-cWW-L-L

Number of instances in this motif group

2

Unit IDs

5ZEU|1|a|C|440
5ZEU|1|a|A|441
5ZEU|1|a|G|442
*
5ZEU|1|a|C|472
5ZEU|1|a|A|473
5ZEU|1|a|G|474
5ZEU|1|a|A|475
5ZEU|1|a|A|476
5ZEU|1|a|G|477

Current chains

Chain a

16S rRNA

Nearby chains

Chain d

30S ribosomal protein S4