IL_5ZEU_057
3D structure
- PDB id
- 5ZEU (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- M. smegmatis P/P state 30S ribosomal subunit
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.7 Å
Loop
- Sequence
- GCCC*GUAAC
- Length
- 9 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_5ZEU_057 not in the Motif Atlas
- Geometric match to IL_4V88_464
- Geometric discrepancy: 0.1235
- The information below is about IL_4V88_464
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- IL_65718.1
- Basepair signature
- cWW-cSH-cWS-cWW-cWW
- Number of instances in this motif group
- 5
Unit IDs
5ZEU|1|a|G|1384
5ZEU|1|a|C|1385
5ZEU|1|a|C|1386
5ZEU|1|a|C|1387
*
5ZEU|1|a|G|1481
5ZEU|1|a|U|1482
5ZEU|1|a|A|1483
5ZEU|1|a|A|1484
5ZEU|1|a|C|1485
Current chains
- Chain a
- 16S rRNA
Nearby chains
- Chain l
- 30S ribosomal protein S12
- Chain u
- Conserved domain protein
- Chain v
- Transfer RNA; tRNA
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