IL_5ZLU_046

3D structure

PDB id

5ZLU (explore in PDB, NAKB, or RNA 3D Hub)

Description

Ribosome Structure bound to ABC-F protein.

Experimental method

ELECTRON MICROSCOPY

Resolution

3.6 Å

Loop

Sequence

CUGCAU*AUGG

Length

10 nucleotides

Bulged bases

5ZLU|1|G|C|1054

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_5ZLU_046 not in the Motif Atlas

Geometric match to IL_5UNE_005

Geometric discrepancy: 0.3863

The information below is about IL_5UNE_005

Detailed Annotation

tSH-tHW

Broad Annotation

No text annotation

Motif group

IL_85033.2

Basepair signature

cWW-cWW-cWW-cWW

Number of instances in this motif group

35

Unit IDs

5ZLU|1|G|C|1051
5ZLU|1|G|U|1052
5ZLU|1|G|G|1053
5ZLU|1|G|C|1054
5ZLU|1|G|A|1055
5ZLU|1|G|U|1056
*
5ZLU|1|G|A|1204
5ZLU|1|G|U|1205
5ZLU|1|G|G|1206
5ZLU|1|G|G|1207

Current chains

Chain G

16S ribosomal RNA

Nearby chains

Chain E

30S ribosomal protein S10

Chain I

30S ribosomal protein S3

Chain S

30S ribosomal protein S14 type Z