IL_5ZLU_089
3D structure
- PDB id
- 5ZLU (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Ribosome Structure bound to ABC-F protein.
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.6 Å
Loop
- Sequence
- GCUAAG*CGAAGC
- Length
- 12 nucleotides
- Bulged bases
- 5ZLU|1|V|A|1156
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_5ZLU_089 not in the Motif Atlas
- Geometric match to IL_7RQB_107
- Geometric discrepancy: 0.2634
- The information below is about IL_7RQB_107
- Detailed Annotation
- UAA/GAN with extra cWW
- Broad Annotation
- No text annotation
- Motif group
- IL_49767.5
- Basepair signature
- cWW-cWW-tWH-L-tHS-cWW
- Number of instances in this motif group
- 5
Unit IDs
5ZLU|1|V|G|997
5ZLU|1|V|C|998
5ZLU|1|V|U|999
5ZLU|1|V|A|1000
5ZLU|1|V|A|1001
5ZLU|1|V|G|1002
*
5ZLU|1|V|C|1153
5ZLU|1|V|G|1154
5ZLU|1|V|A|1155
5ZLU|1|V|A|1156
5ZLU|1|V|G|1157
5ZLU|1|V|C|1158
Current chains
- Chain V
- 23S ribosomal RNA
Nearby chains
- Chain X
- 5S ribosomal RNA; 5S rRNA
- Chain n
- 50S ribosomal protein L20
- Chain o
- 50S ribosomal protein L21
- Chain v
- 50S ribosomal protein L30
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