IL_5ZLU_100

3D structure

PDB id

5ZLU (explore in PDB, NAKB, or RNA 3D Hub)

Description

Ribosome Structure bound to ABC-F protein.

Experimental method

ELECTRON MICROSCOPY

Resolution

3.6 Å

Loop

Sequence

GAC*GGC

Length

6 nucleotides

Bulged bases

5ZLU|1|V|A|1220

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_5ZLU_100 not in the Motif Atlas

Geometric match to IL_5VCI_005

Geometric discrepancy: 0.3115

The information below is about IL_5VCI_005

Detailed Annotation

Not an internal loop

Broad Annotation

Not an internal loop

Motif group

IL_64417.2

Basepair signature

cWW-L-cWW

Number of instances in this motif group

18

Unit IDs

5ZLU|1|V|G|1219
5ZLU|1|V|A|1220
5ZLU|1|V|C|1221
*
5ZLU|1|V|G|1228
5ZLU|1|V|G|1229
5ZLU|1|V|C|1230

Current chains

Chain V

23S ribosomal RNA

Nearby chains

Chain n

50S ribosomal protein L20

Chain o

50S ribosomal protein L21