IL_5ZLU_132
3D structure
- PDB id
- 5ZLU (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Ribosome Structure bound to ABC-F protein.
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.6 Å
Loop
- Sequence
- GUCC*GGC
- Length
- 7 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_5ZLU_132 not in the Motif Atlas
- Geometric match to IL_3V7E_003
- Geometric discrepancy: 0.3128
- The information below is about IL_3V7E_003
- Detailed Annotation
- Major groove platform with extra pair
- Broad Annotation
- Major groove platform
- Motif group
- IL_15698.3
- Basepair signature
- cWW-L-R-L-cWW
- Number of instances in this motif group
- 10
Unit IDs
5ZLU|1|V|G|2400
5ZLU|1|V|U|2401
5ZLU|1|V|C|2402
5ZLU|1|V|C|2403
*
5ZLU|1|V|G|2414
5ZLU|1|V|G|2415
5ZLU|1|V|C|2416
Current chains
- Chain V
- 23S ribosomal RNA
Nearby chains
- Chain AA
- 50S ribosomal protein L35
- Chain i
- 50S ribosomal protein L15
- Chain w
- 50S ribosomal protein L31
- Chain y
- 50S ribosomal protein L33
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