IL_5ZLU_153

3D structure

PDB id

5ZLU (explore in PDB, NAKB, or RNA 3D Hub)

Description

Ribosome Structure bound to ABC-F protein.

Experimental method

ELECTRON MICROSCOPY

Resolution

3.6 Å

Loop

Sequence

CC*GAAG

Length

6 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_5ZLU_153 not in the Motif Atlas

Geometric match to IL_9E6Q_071

Geometric discrepancy: 0.3461

The information below is about IL_9E6Q_071

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

IL_87975.1

Basepair signature

cWW-L-cWW-L

Number of instances in this motif group

10

Unit IDs

5ZLU|1|X|C|30
5ZLU|1|X|C|31
*
5ZLU|1|X|G|51
5ZLU|1|X|A|52
5ZLU|1|X|A|53
5ZLU|1|X|G|54

Current chains

Chain X

5S ribosomal RNA

Nearby chains

Chain c

50S ribosomal protein L5

Chain l

50S ribosomal protein L18