IL_5ZLU_154
3D structure
- PDB id
- 5ZLU (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Ribosome Structure bound to ABC-F protein.
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.6 Å
Loop
- Sequence
- CGAUGGUAC*GGAGAGUAG
- Length
- 18 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_5ZLU_154 not in the Motif Atlas
- Homologous match to IL_7RQB_115
- Geometric discrepancy: 0.1702
- The information below is about IL_7RQB_115
- Detailed Annotation
- Bacterial 5S Loop E
- Broad Annotation
- Loop E
- Motif group
- IL_56455.3
- Basepair signature
- cWW-tSH-tHW-L-R-L-R-L-R-tWH-tHS-cWW
- Number of instances in this motif group
- 6
Unit IDs
5ZLU|1|X|C|71
5ZLU|1|X|G|72
5ZLU|1|X|A|73
5ZLU|1|X|U|74
5ZLU|1|X|G|75
5ZLU|1|X|G|76
5ZLU|1|X|U|77
5ZLU|1|X|A|78
5ZLU|1|X|C|79
*
5ZLU|1|X|G|97
5ZLU|1|X|G|98
5ZLU|1|X|A|99
5ZLU|1|X|G|100
5ZLU|1|X|A|101
5ZLU|1|X|G|102
5ZLU|1|X|U|103
5ZLU|1|X|A|104
5ZLU|1|X|G|105
Current chains
- Chain X
- 5S ribosomal RNA
Nearby chains
- Chain V
- Large subunit ribosomal RNA; LSU rRNA
- Chain j
- 50S ribosomal protein L16
- Chain s
- 50S ribosomal protein L25
Coloring options: