IL_5ZLU_174

3D structure

PDB id

5ZLU (explore in PDB, NAKB, or RNA 3D Hub)

Description

Ribosome Structure bound to ABC-F protein.

Experimental method

ELECTRON MICROSCOPY

Resolution

3.6 Å

Loop

Sequence

CACGCCAUGGGAGCG*CGUGACUGGGGCGAAG

Length

31 nucleotides

Bulged bases

5ZLU|1|G|A|1492, 5ZLU|1|G|A|1493

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

5ZLU|1|G|C|1407
5ZLU|1|G|A|1408
5ZLU|1|G|C|1409
5ZLU|1|G|G|1410
5ZLU|1|G|C|1411
5ZLU|1|G|C|1412
5ZLU|1|G|A|1413
5ZLU|1|G|U|1414
5ZLU|1|G|G|1415
5ZLU|1|G|G|1416
5ZLU|1|G|G|1417
5ZLU|1|G|A|1418
5ZLU|1|G|G|1419
5ZLU|1|G|C|1420
5ZLU|1|G|G|1421
*
5ZLU|1|G|C|1479
5ZLU|1|G|G|1480
5ZLU|1|G|U|1481
5ZLU|1|G|G|1482
5ZLU|1|G|A|1483
5ZLU|1|G|C|1484
5ZLU|1|G|U|1485
5ZLU|1|G|G|1486
5ZLU|1|G|G|1487
5ZLU|1|G|G|1488
5ZLU|1|G|G|1489
5ZLU|1|G|C|1490
5ZLU|1|G|G|1491
5ZLU|1|G|A|1492
5ZLU|1|G|A|1493
5ZLU|1|G|G|1494

Current chains

Chain G

16S ribosomal RNA

Nearby chains

Chain Q

30S ribosomal protein S12

Chain V

Large subunit ribosomal RNA; LSU rRNA

Chain W

RNA (25-mer)

Chain h

50S ribosomal protein L14