Loop IL_5ZLU

3D structure

PDB id: 5ZLU (explore in PDB, NAKB, or RNA 3D Hub)
Description: Ribosome Structure bound to ABC-F protein.
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.6 Å

Loop

Sequence: CGAGCUUAACCGUUGAGCGGAGGCGUAGG*CGAGUCCGAACAGGGCGCAAAG
Length: 51 nucleotides
Bulged bases: 5ZLU|1|V|U|614, 5ZLU|1|V|A|616, 5ZLU|1|V|G|642, 5ZLU|1|V|A|643, 5ZLU|1|V|G|647, 5ZLU|1|V|C|652, 5ZLU|1|V|A|653, 5ZLU|1|V|A|654, 5ZLU|1|V|A|655
QA status: Valid loop

Sequence variability

R3DSVS

Structural variability across Equivalence Class

R3DMCS EC

Structural variability across Rfam

R3DMCS Rfam

Detailed Annotation: No text annotation
Broad Annotation: No text annotation
Motif group: Not in a motif group
Basepair signature: Not available
Number of instances in this motif group: 0

Unit IDs

5ZLU|1|V|C|601
5ZLU|1|V|G|602
5ZLU|1|V|A|603
5ZLU|1|V|G|604
5ZLU|1|V|C|605
5ZLU|1|V|U|606
5ZLU|1|V|U|607
5ZLU|1|V|A|608
5ZLU|1|V|A|609
5ZLU|1|V|C|610
5ZLU|1|V|C|611
5ZLU|1|V|G|612
5ZLU|1|V|U|613
5ZLU|1|V|U|614
5ZLU|1|V|G|615
5ZLU|1|V|A|616
5ZLU|1|V|G|617
5ZLU|1|V|C|618|||A
5ZLU|1|V|G|619
5ZLU|1|V|G|620
5ZLU|1|V|A|621
5ZLU|1|V|G|622
5ZLU|1|V|G|623
5ZLU|1|V|C|624
5ZLU|1|V|G|625
5ZLU|1|V|U|626
5ZLU|1|V|A|627
5ZLU|1|V|G|628
5ZLU|1|V|G|629
*
5ZLU|1|V|C|635
5ZLU|1|V|G|636
5ZLU|1|V|A|637
5ZLU|1|V|G|638
5ZLU|1|V|U|639
5ZLU|1|V|C|640
5ZLU|1|V|C|641
5ZLU|1|V|G|642
5ZLU|1|V|A|643
5ZLU|1|V|A|644
5ZLU|1|V|C|645
5ZLU|1|V|A|646
5ZLU|1|V|G|647
5ZLU|1|V|G|648
5ZLU|1|V|G|649
5ZLU|1|V|C|650
5ZLU|1|V|G|651
5ZLU|1|V|C|652
5ZLU|1|V|A|653
5ZLU|1|V|A|654
5ZLU|1|V|A|655
5ZLU|1|V|G|656

Current chains

Chain V: 23S ribosomal RNA

Nearby chains

Chain AA: 50S ribosomal protein L35
Chain b: 50S ribosomal protein L4
Chain i: 50S ribosomal protein L15
Chain y: 50S ribosomal protein L33

IL_5ZLU_180