3D structure

PDB id
5ZLU (explore in PDB, NAKB, or RNA 3D Hub)
Description
Ribosome Structure bound to ABC-F protein.
Experimental method
ELECTRON MICROSCOPY
Resolution
3.6 Å

Loop

Sequence
CGCUGACUGGGGCCUGUAG*CGAAGGGUCCCAGGUGGAG
Length
38 nucleotides
Bulged bases
None detected
QA status
Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.
R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
R3DMCS Rfam
Detailed Annotation
No text annotation
Broad Annotation
No text annotation
Motif group
Not in a motif group
Basepair signature
Not available
Number of instances in this motif group
0

Unit IDs

5ZLU|1|V|C|844
5ZLU|1|V|G|845
5ZLU|1|V|C|846
5ZLU|1|V|U|847
5ZLU|1|V|G|848
5ZLU|1|V|A|849
5ZLU|1|V|C|850
5ZLU|1|V|U|851
5ZLU|1|V|G|852
5ZLU|1|V|G|853
5ZLU|1|V|G|854
5ZLU|1|V|G|855
5ZLU|1|V|C|856
5ZLU|1|V|C|857
5ZLU|1|V|U|858
5ZLU|1|V|G|859
5ZLU|1|V|U|860
5ZLU|1|V|A|861
5ZLU|1|V|G|862
*
5ZLU|1|V|C|915
5ZLU|1|V|G|916
5ZLU|1|V|A|917
5ZLU|1|V|A|918
5ZLU|1|V|G|919
5ZLU|1|V|G|920
5ZLU|1|V|G|921
5ZLU|1|V|U|922
5ZLU|1|V|C|923
5ZLU|1|V|C|924
5ZLU|1|V|C|925
5ZLU|1|V|A|926
5ZLU|1|V|G|928
5ZLU|1|V|G|929
5ZLU|1|V|U|930
5ZLU|1|V|G|931
5ZLU|1|V|G|932
5ZLU|1|V|A|933
5ZLU|1|V|G|934

Current chains

Chain V
23S ribosomal RNA

Nearby chains

Chain X
5S ribosomal RNA; 5S rRNA
Chain j
50S ribosomal protein L16
Chain s
50S ribosomal protein L25
Chain t
50S ribosomal protein L27
Chain v
50S ribosomal protein L30

Coloring options:

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