IL_5ZLU_193

3D structure

PDB id

5ZLU (explore in PDB, NAKB, or RNA 3D Hub)

Description

Ribosome Structure bound to ABC-F protein.

Experimental method

ELECTRON MICROSCOPY

Resolution

3.6 Å

Loop

Sequence

GCGAAAUUCCUUG*CCUGCAC

Length

20 nucleotides

Bulged bases

5ZLU|1|V|A|1937, 5ZLU|1|V|A|1938, 5ZLU|1|V|U|1939, 5ZLU|1|V|U|1944, 5ZLU|1|V|U|1963

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

5ZLU|1|V|G|1933
5ZLU|1|V|C|1934
5ZLU|1|V|G|1935
5ZLU|1|V|A|1936
5ZLU|1|V|A|1937
5ZLU|1|V|A|1938
5ZLU|1|V|U|1939
5ZLU|1|V|U|1940
5ZLU|1|V|C|1941
5ZLU|1|V|C|1942
5ZLU|1|V|U|1943
5ZLU|1|V|U|1944
5ZLU|1|V|G|1945
*
5ZLU|1|V|C|1961
5ZLU|1|V|C|1962
5ZLU|1|V|U|1963
5ZLU|1|V|G|1964
5ZLU|1|V|C|1965
5ZLU|1|V|A|1966
5ZLU|1|V|C|1967

Current chains

Chain V

23S ribosomal RNA

Nearby chains

Chain EE

Macrolide efflux protein

Chain G

Small subunit ribosomal RNA; SSU rRNA

Chain Z

50S ribosomal protein L2