3D structure

PDB id
5ZLU (explore in PDB, NAKB, or RNA 3D Hub)
Description
Ribosome Structure bound to ABC-F protein.
Experimental method
ELECTRON MICROSCOPY
Resolution
3.6 Å

Loop

Sequence
CGCCUGCGUAGGAUAGGUGGGAGCCUGUGAAC*GGGAGGCGCCGGUGAAAUACCACCCUGGCG
Length
62 nucleotides
Bulged bases
5ZLU|1|V|G|2116, 5ZLU|1|V|A|2117, 5ZLU|1|V|G|2125, 5ZLU|1|V|A|2126, 5ZLU|1|V|G|2131, 5ZLU|1|V|G|2133, 5ZLU|1|V|A|2135, 5ZLU|1|V|G|2156, 5ZLU|1|V|G|2157
QA status
Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.
R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
R3DMCS Rfam
Detailed Annotation
No text annotation
Broad Annotation
No text annotation
Motif group
Not in a motif group
Basepair signature
Not available
Number of instances in this motif group
0

Unit IDs

5ZLU|1|V|C|2105
5ZLU|1|V|G|2106
5ZLU|1|V|C|2107
5ZLU|1|V|C|2108
5ZLU|1|V|U|2109
5ZLU|1|V|G|2110
5ZLU|1|V|C|2111
5ZLU|1|V|G|2112
5ZLU|1|V|U|2113
5ZLU|1|V|A|2114
5ZLU|1|V|G|2115
5ZLU|1|V|G|2116
5ZLU|1|V|A|2117
5ZLU|1|V|U|2118
5ZLU|1|V|A|2119
5ZLU|1|V|G|2120
5ZLU|1|V|G|2121
5ZLU|1|V|U|2122
5ZLU|1|V|G|2123
5ZLU|1|V|G|2124
5ZLU|1|V|G|2125
5ZLU|1|V|A|2126
5ZLU|1|V|G|2127
5ZLU|1|V|C|2128
5ZLU|1|V|C|2129
5ZLU|1|V|U|2130
5ZLU|1|V|G|2131
5ZLU|1|V|U|2132
5ZLU|1|V|G|2133
5ZLU|1|V|A|2134
5ZLU|1|V|A|2135
5ZLU|1|V|C|2136
*
5ZLU|1|V|G|2155
5ZLU|1|V|G|2156
5ZLU|1|V|G|2157
5ZLU|1|V|A|2158
5ZLU|1|V|G|2159
5ZLU|1|V|G|2160
5ZLU|1|V|C|2161
5ZLU|1|V|G|2162
5ZLU|1|V|C|2163
5ZLU|1|V|C|2164
5ZLU|1|V|G|2165
5ZLU|1|V|G|2166
5ZLU|1|V|U|2167
5ZLU|1|V|G|2168
5ZLU|1|V|A|2169
5ZLU|1|V|A|2170
5ZLU|1|V|A|2171
5ZLU|1|V|U|2172
5ZLU|1|V|A|2173
5ZLU|1|V|C|2174
5ZLU|1|V|C|2175
5ZLU|1|V|A|2176
5ZLU|1|V|C|2177
5ZLU|1|V|C|2178
5ZLU|1|V|C|2179
5ZLU|1|V|U|2180
5ZLU|1|V|G|2181
5ZLU|1|V|G|2182
5ZLU|1|V|C|2183
5ZLU|1|V|G|2184

Current chains

Chain V
23S ribosomal RNA

Nearby chains

Chain EE
Macrolide efflux protein
Chain Y
50S ribosomal protein L1

Coloring options:

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