IL_6AWB_027

3D structure

PDB id

6AWB (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of 30S ribosomal subunit and RNA polymerase complex in non-rotated state

Experimental method

ELECTRON MICROSCOPY

Resolution

6.7 Å

Loop

Sequence

CGUAAAG*CG

Length

9 nucleotides

Bulged bases

None detected

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_6AWB_027 not in the Motif Atlas

Homologous match to IL_6CZR_134

Geometric discrepancy: 0.2854

The information below is about IL_6CZR_134

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

IL_38186.5

Basepair signature

cWW-L-cWW-L-L-R

Number of instances in this motif group

5

Unit IDs

6AWB|1|A|C|569
6AWB|1|A|G|570
6AWB|1|A|U|571
6AWB|1|A|A|572
6AWB|1|A|A|573
6AWB|1|A|A|574
6AWB|1|A|G|575
*
6AWB|1|A|C|880
6AWB|1|A|G|881

Current chains

Chain A

16S rRNA

Nearby chains

Chain O

30S ribosomal protein S12