IL_6AWB_038
3D structure
- PDB id
- 6AWB (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Structure of 30S ribosomal subunit and RNA polymerase complex in non-rotated state
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 6.7 Å
Loop
- Sequence
- GGAGUACGG*UUAAAAC
- Length
- 16 nucleotides
- Bulged bases
- None detected
- QA status
- Unknown status
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_6AWB_038 not in the Motif Atlas
- Homologous match to IL_6CZR_146
- Geometric discrepancy: 0.3116
- The information below is about IL_6CZR_146
- Detailed Annotation
- 9x7 Sarcin-Ricin with inserted C; G-bulge
- Broad Annotation
- Sarcin-Ricin; G-bulge
- Motif group
- IL_68633.1
- Basepair signature
- cWW-L-R-L-R-cSH-tWH-tHS-R-L-cWW-L
- Number of instances in this motif group
- 1
Unit IDs
6AWB|1|A|G|887
6AWB|1|A|G|888
6AWB|1|A|A|889
6AWB|1|A|G|890
6AWB|1|A|U|891
6AWB|1|A|A|892
6AWB|1|A|C|893
6AWB|1|A|G|894
6AWB|1|A|G|895
*
6AWB|1|A|U|904
6AWB|1|A|U|905
6AWB|1|A|A|906
6AWB|1|A|A|907
6AWB|1|A|A|908
6AWB|1|A|A|909
6AWB|1|A|C|910
Current chains
- Chain A
- 16S rRNA
Nearby chains
- Chain O
- 30S ribosomal protein S12
Coloring options: