IL_6AWC_045

3D structure

PDB id

6AWC (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of 30S ribosomal subunit and RNA polymerase complex in rotated state

Experimental method

ELECTRON MICROSCOPY

Resolution

7.9 Å

Loop

Sequence

GAAG*UGUGCCUUCGGGAAC

Length

19 nucleotides

Bulged bases

6AWC|1|A|U|1029, 6AWC|1|A|U|1030, 6AWC|1|A|C|1031, 6AWC|1|A|G|1032

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

6AWC|1|A|G|1003
6AWC|1|A|A|1004
6AWC|1|A|A|1005
6AWC|1|A|G|1006
*
6AWC|1|A|U|1023
6AWC|1|A|G|1024
6AWC|1|A|U|1025
6AWC|1|A|G|1026
6AWC|1|A|C|1027
6AWC|1|A|C|1028
6AWC|1|A|U|1029
6AWC|1|A|U|1030
6AWC|1|A|C|1031
6AWC|1|A|G|1032
6AWC|1|A|G|1033
6AWC|1|A|G|1034
6AWC|1|A|A|1035
6AWC|1|A|A|1036
6AWC|1|A|C|1037

Current chains

Chain A

16S rRNA

Nearby chains

Chain Q

30S ribosomal protein S14