IL_6AWC_057

3D structure

PDB id

6AWC (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of 30S ribosomal subunit and RNA polymerase complex in rotated state

Experimental method

ELECTRON MICROSCOPY

Resolution

7.9 Å

Loop

Sequence

CGGAUU*AUGAAG

Length

12 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_6AWC_057 not in the Motif Atlas

Homologous match to IL_6CZR_164

Geometric discrepancy: 0.321

The information below is about IL_6CZR_164

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

6AWC|1|A|C|1303
6AWC|1|A|G|1304
6AWC|1|A|G|1305
6AWC|1|A|A|1306
6AWC|1|A|U|1307
6AWC|1|A|U|1308
*
6AWC|1|A|A|1329
6AWC|1|A|U|1330
6AWC|1|A|G|1331
6AWC|1|A|A|1332
6AWC|1|A|A|1333
6AWC|1|A|G|1334

Current chains

Chain A

16S rRNA

Nearby chains

Chain P

30S ribosomal protein S13