IL_6AWD_044

3D structure

PDB id

6AWD (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of 30S (S1 depleted) ribosomal subunit and RNA polymerase complex

Experimental method

ELECTRON MICROSCOPY

Resolution

8.1 Å

Loop

Sequence

GAAG*UGUGCCUUCGGGAAC

Length

19 nucleotides

Bulged bases

6AWD|1|A|U|1025, 6AWD|1|A|U|1029, 6AWD|1|A|C|1031, 6AWD|1|A|G|1032

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

6AWD|1|A|G|1003
6AWD|1|A|A|1004
6AWD|1|A|A|1005
6AWD|1|A|G|1006
*
6AWD|1|A|U|1023
6AWD|1|A|G|1024
6AWD|1|A|U|1025
6AWD|1|A|G|1026
6AWD|1|A|C|1027
6AWD|1|A|C|1028
6AWD|1|A|U|1029
6AWD|1|A|U|1030
6AWD|1|A|C|1031
6AWD|1|A|G|1032
6AWD|1|A|G|1033
6AWD|1|A|G|1034
6AWD|1|A|A|1035
6AWD|1|A|A|1036
6AWD|1|A|C|1037

Current chains

Chain A

16S rRNA

Nearby chains