IL_6AWD_070
3D structure
- PDB id
- 6AWD (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Structure of 30S (S1 depleted) ribosomal subunit and RNA polymerase complex
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 8.1 Å
Loop
- Sequence
- UAA*UG
- Length
- 5 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_6AWD_070 not in the Motif Atlas
- Homologous match to IL_5J7L_028
- Geometric discrepancy: 0.2907
- The information below is about IL_5J7L_028
- Detailed Annotation
- Major groove platform
- Broad Annotation
- No text annotation
- Motif group
- IL_48076.6
- Basepair signature
- cWW-cSH-cWW
- Number of instances in this motif group
- 41
Unit IDs
6AWD|1|A|U|594
6AWD|1|A|A|595
6AWD|1|A|A|596
*
6AWD|1|A|U|644
6AWD|1|A|G|645
Current chains
- Chain A
- 16S rRNA
Nearby chains
- Chain K
- 30S ribosomal protein S8
- Chain T
- 30S ribosomal protein S17
Coloring options: