IL_6AZ1_015
3D structure
- PDB id
- 6AZ1 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Cryo-EM structure of the small subunit of Leishmania ribosome bound to paromomycin
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.7 Å
Loop
- Sequence
- UGACAAAACCAAUGCCUGCAGUAACACCCAGCAGUG*CAA
- Length
- 39 nucleotides
- Bulged bases
- 6AZ1|1|1|A|281, 6AZ1|1|1|A|285, 6AZ1|1|1|A|288, 6AZ1|1|1|U|290
- QA status
- Missing nucleotides
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
6AZ1|1|1|U|247
6AZ1|1|1|G|248
6AZ1|1|1|A|249
6AZ1|1|1|C|250
6AZ1|1|1|A|251
6AZ1|1|1|A|255
6AZ1|1|1|A|256
6AZ1|1|1|A|257
6AZ1|1|1|C|258
6AZ1|1|1|C|259
6AZ1|1|1|A|260
6AZ1|1|1|A|261
6AZ1|1|1|U|262
6AZ1|1|1|G|263
6AZ1|1|1|C|264
6AZ1|1|1|C|265
6AZ1|1|1|U|266
6AZ1|1|1|G|273
6AZ1|1|1|C|274
6AZ1|1|1|A|275
6AZ1|1|1|G|276
6AZ1|1|1|U|277
6AZ1|1|1|A|278
6AZ1|1|1|A|279
6AZ1|1|1|C|280
6AZ1|1|1|A|281
6AZ1|1|1|C|282
6AZ1|1|1|C|283
6AZ1|1|1|C|284
6AZ1|1|1|A|285
6AZ1|1|1|G|286
6AZ1|1|1|C|287
6AZ1|1|1|A|288
6AZ1|1|1|G|289
6AZ1|1|1|U|290
6AZ1|1|1|G|291
*
6AZ1|1|1|C|298
6AZ1|1|1|A|299
6AZ1|1|1|A|300
Current chains
- Chain 1
- ribosomal RNA 18S
Nearby chains
- Chain E
- ribosomal protein S4e
- Chain G
- ribosomal protein S6e
- Chain U
- ribosomal protein S17
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