IL_6AZ1_061

3D structure

PDB id

6AZ1 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Cryo-EM structure of the small subunit of Leishmania ribosome bound to paromomycin

Experimental method

ELECTRON MICROSCOPY

Resolution

2.7 Å

Loop

Sequence

CCCA*UCUG

Length

8 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

6AZ1|1|1|C|1693
6AZ1|1|1|C|1694
6AZ1|1|1|C|1695
6AZ1|1|1|A|1696
*
6AZ1|1|1|U|1779
6AZ1|1|1|C|1780
6AZ1|1|1|U|1781
6AZ1|1|1|G|1782

Current chains

Chain 1

ribosomal RNA 18S

Nearby chains

Chain L

ribosomal protein S9

Chain M

ribosomal protein S10

Chain g

LACK1