IL_6AZ1_092
3D structure
- PDB id
- 6AZ1 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Cryo-EM structure of the small subunit of Leishmania ribosome bound to paromomycin
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.7 Å
Loop
- Sequence
- GAGAACAAG*CCCCGGAAUC
- Length
- 19 nucleotides
- Bulged bases
- 6AZ1|1|1|C|1938, 6AZ1|1|1|G|1940
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
6AZ1|1|1|G|1881
6AZ1|1|1|A|1882
6AZ1|1|1|G|1883
6AZ1|1|1|A|1884
6AZ1|1|1|A|1885
6AZ1|1|1|C|1886
6AZ1|1|1|A|1887
6AZ1|1|1|A|1888
6AZ1|1|1|G|1889
*
6AZ1|1|1|C|1935
6AZ1|1|1|C|1936
6AZ1|1|1|C|1937
6AZ1|1|1|C|1938
6AZ1|1|1|G|1939
6AZ1|1|1|G|1940
6AZ1|1|1|A|1941
6AZ1|1|1|A|1942
6AZ1|1|1|U|1943
6AZ1|1|1|C|1944
Current chains
- Chain 1
- ribosomal RNA 18S
Nearby chains
- Chain C
- ribosomal protein S3
- Chain H
- ribosomal protein S7
- Chain L
- ribosomal protein S9
- Chain M
- ribosomal protein S10
- Chain S
- ribosomal protein S14
- Chain X
- ribosomal protein S19e
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