IL_6B4V_020
3D structure
- PDB id
- 6B4V (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Antibiotic blasticidin S and E. coli release factor 1 bound to the 70S ribosome
- Experimental method
- X-RAY DIFFRACTION
- Resolution
- 3.4 Å
Loop
- Sequence
- CG(PSU)GCCAG*CGGUAAUACG
- Length
- 18 nucleotides
- Bulged bases
- 6B4V|1|A|A|532, 6B4V|1|A|U|534, 6B4V|1|A|A|535
- QA status
- Modified nucleotides: PSU
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
6B4V|1|A|C|514
6B4V|1|A|G|515
6B4V|1|A|PSU|516
6B4V|1|A|G|517
6B4V|1|A|C|518
6B4V|1|A|C|519
6B4V|1|A|A|520
6B4V|1|A|G|521
*
6B4V|1|A|C|528
6B4V|1|A|G|529
6B4V|1|A|G|530
6B4V|1|A|U|531
6B4V|1|A|A|532
6B4V|1|A|A|533
6B4V|1|A|U|534
6B4V|1|A|A|535
6B4V|1|A|C|536
6B4V|1|A|G|537
Current chains
- Chain A
- 16S ribosomal RNA
Nearby chains
- Chain HA
- mRNA
- Chain JA
- Peptide chain release factor 1
- Chain LA
- 30S ribosomal protein S3
- Chain MA
- 30S ribosomal protein S4
- Chain UA
- 30S ribosomal protein S12
Coloring options: