3D structure

PDB id
6BOH (explore in PDB, NAKB, or RNA 3D Hub)
Description
Antibiotic blasticidin S and E. coli release factor 1 (containing deletion 302-304) bound to the 70S ribosome
Experimental method
X-RAY DIFFRACTION
Resolution
3.4 Å

Loop

Sequence
GUGAAAGAC*GGGGAGC
Length
16 nucleotides
Bulged bases
None detected
QA status
Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.
R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
R3DMCS Rfam
Detailed Annotation
No text annotation
Broad Annotation
No text annotation
Motif group
Not in a motif group
Basepair signature
Not available
Number of instances in this motif group
0

Unit IDs

6BOH|1|A|G|604
6BOH|1|A|U|605
6BOH|1|A|G|606
6BOH|1|A|A|607
6BOH|1|A|A|608
6BOH|1|A|A|609
6BOH|1|A|G|610
6BOH|1|A|A|611
6BOH|1|A|C|612
*
6BOH|1|A|G|628
6BOH|1|A|G|629
6BOH|1|A|G|630
6BOH|1|A|G|631
6BOH|1|A|A|632
6BOH|1|A|G|633
6BOH|1|A|C|634

Current chains

Chain A
16S ribosomal RNA

Nearby chains

Chain AB
30S ribosomal protein S17
Chain NA
50S ribosomal protein S4
Chain RA
30S ribosomal protein S8
Chain ZA
30S ribosomal protein S16

Coloring options:

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