3D structure

PDB id
6BOH (explore in PDB, NAKB, or RNA 3D Hub)
Description
Antibiotic blasticidin S and E. coli release factor 1 (containing deletion 302-304) bound to the 70S ribosome
Experimental method
X-RAY DIFFRACTION
Resolution
3.4 Å

Loop

Sequence
CGGAUUGGG*CCCAUGAAG
Length
18 nucleotides
Bulged bases
None detected
QA status
Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.
R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
R3DMCS Rfam
Detailed Annotation
No text annotation
Broad Annotation
No text annotation
Motif group
Not in a motif group
Basepair signature
Not available
Number of instances in this motif group
0

Unit IDs

6BOH|1|A|C|1303
6BOH|1|A|G|1304
6BOH|1|A|G|1305
6BOH|1|A|A|1306
6BOH|1|A|U|1307
6BOH|1|A|U|1308
6BOH|1|A|G|1309
6BOH|1|A|G|1310
6BOH|1|A|G|1311
*
6BOH|1|A|C|1326
6BOH|1|A|C|1327
6BOH|1|A|C|1328
6BOH|1|A|A|1329
6BOH|1|A|U|1330
6BOH|1|A|G|1331
6BOH|1|A|A|1332
6BOH|1|A|A|1333
6BOH|1|A|G|1334

Current chains

Chain A
16S ribosomal RNA

Nearby chains

Chain BA
50S ribosomal protein L31
Chain CB
30S ribosomal protein S19
Chain EB
30S ribosomal protein Thx
Chain WA
30S ribosomal protein S13

Coloring options:

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