IL_6BOH_051
3D structure
- PDB id
- 6BOH (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Antibiotic blasticidin S and E. coli release factor 1 (containing deletion 302-304) bound to the 70S ribosome
- Experimental method
- X-RAY DIFFRACTION
- Resolution
- 3.4 Å
Loop
- Sequence
- C(5MC)G*CAAG
- Length
- 7 nucleotides
- Bulged bases
- 6BOH|1|A|A|1503
- QA status
- Modified nucleotides: 5MC
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_6BOH_051 not in the Motif Atlas
- Homologous match to IL_6CZR_165
- Geometric discrepancy: 0.1486
- The information below is about IL_6CZR_165
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- IL_61438.3
- Basepair signature
- cWW-L-cWW
- Number of instances in this motif group
- 5
Unit IDs
6BOH|1|A|C|1399
6BOH|1|A|5MC|1400
6BOH|1|A|G|1401
*
6BOH|1|A|C|1501
6BOH|1|A|A|1502
6BOH|1|A|A|1503
6BOH|1|A|G|1504
Current chains
- Chain A
- 16S ribosomal RNA
Nearby chains
- Chain HA
- mRNA
- Chain IA
- Transfer RNA; tRNA
- Chain JA
- Peptide chain release factor 1
- Chain OA
- 30S ribosomal protein S5
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