IL_6BOH_096
3D structure
- PDB id
- 6BOH (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Antibiotic blasticidin S and E. coli release factor 1 (containing deletion 302-304) bound to the 70S ribosome
- Experimental method
- X-RAY DIFFRACTION
- Resolution
- 3.4 Å
Loop
- Sequence
- GAUG*CGC
- Length
- 7 nucleotides
- Bulged bases
- 6BOH|1|B|U|1033
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_6BOH_096 not in the Motif Atlas
- Homologous match to IL_4WF9_041
- Geometric discrepancy: 0.1383
- The information below is about IL_4WF9_041
- Detailed Annotation
- Isolated non-canonical cWW pair
- Broad Annotation
- Isolated non-canonical cWW pair
- Motif group
- IL_57744.1
- Basepair signature
- cWW-cWW-cWW
- Number of instances in this motif group
- 22
Unit IDs
6BOH|1|B|G|1031
6BOH|1|B|A|1032
6BOH|1|B|U|1033
6BOH|1|B|G|1034
*
6BOH|1|B|C|1121
6BOH|1|B|G|1122
6BOH|1|B|C|1123
Current chains
- Chain B
- 23S ribosomal RNA
Nearby chains
- Chain GA
- 50S ribosomal protein L36
- Chain I
- 50S ribosomal protein L6
- Chain N
- 50S ribosomal protein L16
Coloring options: