IL_6BOH_097

3D structure

PDB id

6BOH (explore in PDB, NAKB, or RNA 3D Hub)

Description

Antibiotic blasticidin S and E. coli release factor 1 (containing deletion 302-304) bound to the 70S ribosome

Experimental method

X-RAY DIFFRACTION

Resolution

3.4 Å

Loop

Sequence

GCGAAGACAG*UCGAGU

Length

16 nucleotides

Bulged bases

6BOH|1|B|A|1046

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

6BOH|1|B|G|1042
6BOH|1|B|C|1043
6BOH|1|B|G|1044
6BOH|1|B|A|1045
6BOH|1|B|A|1046
6BOH|1|B|G|1047
6BOH|1|B|A|1048
6BOH|1|B|C|1049
6BOH|1|B|A|1050
6BOH|1|B|G|1051
*
6BOH|1|B|U|1108
6BOH|1|B|C|1109
6BOH|1|B|G|1110
6BOH|1|B|A|1111
6BOH|1|B|G|1112
6BOH|1|B|U|1113

Current chains

Chain B

23S ribosomal RNA

Nearby chains

Chain I

50S ribosomal protein L6