IL_6BOH_213

3D structure

PDB id

6BOH (explore in PDB, NAKB, or RNA 3D Hub)

Description

Antibiotic blasticidin S and E. coli release factor 1 (containing deletion 302-304) bound to the 70S ribosome

Experimental method

X-RAY DIFFRACTION

Resolution

3.4 Å

Loop

Sequence

CUACAAAG*CAAAAAGG

Length

16 nucleotides

Bulged bases

6BOH|1|FB|A|1286

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

6BOH|1|FB|C|1246
6BOH|1|FB|U|1247
6BOH|1|FB|A|1248
6BOH|1|FB|C|1249
6BOH|1|FB|A|1250
6BOH|1|FB|A|1251
6BOH|1|FB|A|1252
6BOH|1|FB|G|1253
*
6BOH|1|FB|C|1284
6BOH|1|FB|A|1285
6BOH|1|FB|A|1286
6BOH|1|FB|A|1287
6BOH|1|FB|A|1288
6BOH|1|FB|A|1289
6BOH|1|FB|G|1290
6BOH|1|FB|G|1291

Current chains

Chain FB

16S ribosomal RNA

Nearby chains

Chain CD

30S ribosomal protein S14 type Z

Chain JD

30S ribosomal protein Thx

Chain VC

30S ribosomal protein S7

Chain XC

30S ribosomal protein S9

Chain YC

30S ribosomal protein S10