IL_6BOH_339
3D structure
- PDB id
- 6BOH (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Antibiotic blasticidin S and E. coli release factor 1 (containing deletion 302-304) bound to the 70S ribosome
- Experimental method
- X-RAY DIFFRACTION
- Resolution
- 3.4 Å
Loop
- Sequence
- CUUGACAUGCUAGGGAACCCGGGUGAAAGCCUGGGGUGCCCCGCGAGGGGAGCCCUAGCACAG*CUUACG
- Length
- 69 nucleotides
- Bulged bases
- 6BOH|1|A|G|1002, 6BOH|1|A|G|1024, 6BOH|1|A|U|1025, 6BOH|1|A|C|1028|||B, 6BOH|1|A|C|1028|||C, 6BOH|1|A|C|1030, 6BOH|1|A|G|1032|||C, 6BOH|1|A|U|1212, 6BOH|1|A|C|1214
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
6BOH|1|A|C|990
6BOH|1|A|U|991
6BOH|1|A|U|992
6BOH|1|A|G|993
6BOH|1|A|A|994
6BOH|1|A|C|995
6BOH|1|A|A|996
6BOH|1|A|U|997
6BOH|1|A|G|998|||A
6BOH|1|A|C|998|||B
6BOH|1|A|U|999
6BOH|1|A|A|1000
6BOH|1|A|G|1001
6BOH|1|A|G|1002
6BOH|1|A|G|1003
6BOH|1|A|A|1004
6BOH|1|A|A|1005
6BOH|1|A|C|1006
6BOH|1|A|C|1007
6BOH|1|A|C|1008
6BOH|1|A|G|1009
6BOH|1|A|G|1010
6BOH|1|A|G|1011
6BOH|1|A|U|1012
6BOH|1|A|G|1013
6BOH|1|A|A|1014
6BOH|1|A|A|1015
6BOH|1|A|A|1016
6BOH|1|A|G|1017
6BOH|1|A|C|1018
6BOH|1|A|C|1019
6BOH|1|A|U|1020
6BOH|1|A|G|1021
6BOH|1|A|G|1022
6BOH|1|A|G|1023
6BOH|1|A|G|1024
6BOH|1|A|U|1025
6BOH|1|A|G|1026
6BOH|1|A|C|1027
6BOH|1|A|C|1028|||A
6BOH|1|A|C|1028|||B
6BOH|1|A|C|1028|||C
6BOH|1|A|G|1029
6BOH|1|A|C|1030
6BOH|1|A|G|1031
6BOH|1|A|A|1032|||A
6BOH|1|A|G|1032|||B
6BOH|1|A|G|1032|||C
6BOH|1|A|G|1033
6BOH|1|A|G|1034
6BOH|1|A|A|1035
6BOH|1|A|G|1036
6BOH|1|A|C|1037
6BOH|1|A|C|1038
6BOH|1|A|C|1039
6BOH|1|A|U|1040
6BOH|1|A|A|1041
6BOH|1|A|G|1042
6BOH|1|A|C|1043
6BOH|1|A|A|1044
6BOH|1|A|C|1045
6BOH|1|A|A|1046
6BOH|1|A|G|1047
*
6BOH|1|A|C|1210
6BOH|1|A|U|1211
6BOH|1|A|U|1212
6BOH|1|A|A|1213
6BOH|1|A|C|1214
6BOH|1|A|G|1215
Current chains
- Chain A
- 16S ribosomal RNA
Nearby chains
- Chain CB
- 30S ribosomal protein S19
- Chain KA
- Peptide chain release factor 1
- Chain XA
- 30S ribosomal protein S14 type Z
Coloring options: