IL_6BOH_356

3D structure

PDB id

6BOH (explore in PDB, NAKB, or RNA 3D Hub)

Description

Antibiotic blasticidin S and E. coli release factor 1 (containing deletion 302-304) bound to the 70S ribosome

Experimental method

X-RAY DIFFRACTION

Resolution

3.4 Å

Loop

Sequence

CCUGCGUAGGAUAG*CCUGG

Length

19 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

6BOH|1|B|C|2107
6BOH|1|B|C|2108
6BOH|1|B|U|2109
6BOH|1|B|G|2110
6BOH|1|B|C|2111
6BOH|1|B|G|2112
6BOH|1|B|U|2113
6BOH|1|B|A|2114
6BOH|1|B|G|2115
6BOH|1|B|G|2116
6BOH|1|B|A|2117
6BOH|1|B|U|2118
6BOH|1|B|A|2119
6BOH|1|B|G|2120
*
6BOH|1|B|C|2178
6BOH|1|B|C|2179
6BOH|1|B|U|2180
6BOH|1|B|G|2181
6BOH|1|B|G|2182

Current chains

Chain B

23S ribosomal RNA

Nearby chains

Chain D

Transfer RNA; tRNA