IL_6BOH_370

3D structure

PDB id

6BOH (explore in PDB, NAKB, or RNA 3D Hub)

Description

Antibiotic blasticidin S and E. coli release factor 1 (containing deletion 302-304) bound to the 70S ribosome

Experimental method

X-RAY DIFFRACTION

Resolution

3.4 Å

Loop

Sequence

CGAAGUC*GCCGAG

Length

13 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

6BOH|1|FB|C|1431
6BOH|1|FB|G|1432
6BOH|1|FB|A|1433
6BOH|1|FB|A|1434
6BOH|1|FB|G|1435
6BOH|1|FB|U|1436
6BOH|1|FB|C|1437
*
6BOH|1|FB|G|1464
6BOH|1|FB|C|1465
6BOH|1|FB|C|1466
6BOH|1|FB|G|1467
6BOH|1|FB|A|1468
6BOH|1|FB|G|1469

Current chains

Chain FB

16S ribosomal RNA

Nearby chains

Chain GB

Large subunit ribosomal RNA; LSU rRNA

Chain ID

30S ribosomal protein S20

Chain VB

50S ribosomal protein L19