IL_6BOH_381
3D structure
- PDB id
- 6BOH (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Antibiotic blasticidin S and E. coli release factor 1 (containing deletion 302-304) bound to the 70S ribosome
- Experimental method
- X-RAY DIFFRACTION
- Resolution
- 3.4 Å
Loop
- Sequence
- GUUCCC*GAACAC
- Length
- 12 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_6BOH_381 not in the Motif Atlas
- Homologous match to IL_7A0S_105
- Geometric discrepancy: 0.4171
- The information below is about IL_7A0S_105
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- IL_93630.2
- Basepair signature
- cWW-L-R-L-cWW-L-L
- Number of instances in this motif group
- 4
Unit IDs
6BOH|1|HB|G|33
6BOH|1|HB|U|34
6BOH|1|HB|U|35
6BOH|1|HB|C|36
6BOH|1|HB|C|37
6BOH|1|HB|C|38
*
6BOH|1|HB|G|44
6BOH|1|HB|A|45
6BOH|1|HB|A|46
6BOH|1|HB|C|47
6BOH|1|HB|A|48
6BOH|1|HB|C|49
Current chains
- Chain HB
- 5S ribosomal RNA
Nearby chains
- Chain GB
- Large subunit ribosomal RNA; LSU rRNA
- Chain GC
- 50S ribosomal protein L31
- Chain MB
- 50S ribosomal protein L5
- Chain UB
- 50S ribosomal protein L18
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