IL_6BOH_399

3D structure

PDB id

6BOH (explore in PDB, NAKB, or RNA 3D Hub)

Description

Antibiotic blasticidin S and E. coli release factor 1 (containing deletion 302-304) bound to the 70S ribosome

Experimental method

X-RAY DIFFRACTION

Resolution

3.4 Å

Loop

Sequence

CGGAUUG*CAUGAAG

Length

14 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

6BOH|1|FB|C|1303
6BOH|1|FB|G|1304
6BOH|1|FB|G|1305
6BOH|1|FB|A|1306
6BOH|1|FB|U|1307
6BOH|1|FB|U|1308
6BOH|1|FB|G|1309
*
6BOH|1|FB|C|1328
6BOH|1|FB|A|1329
6BOH|1|FB|U|1330
6BOH|1|FB|G|1331
6BOH|1|FB|A|1332
6BOH|1|FB|A|1333
6BOH|1|FB|G|1334

Current chains

Chain FB

16S ribosomal RNA

Nearby chains

Chain BD

30S ribosomal protein S13

Chain GC

50S ribosomal protein L31

Chain HD

30S ribosomal protein S19

Chain JD

30S ribosomal protein Thx