IL_6BOK_019
3D structure
- PDB id
- 6BOK (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- E. coli release factor 1 (containing deletion 302-304) bound to the 70S ribosome
- Experimental method
- X-RAY DIFFRACTION
- Resolution
- 3.55 Å
Loop
- Sequence
- GAAACC*GACUGAC
- Length
- 13 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_6BOK_019 not in the Motif Atlas
- Geometric match to IL_4LFB_019
- Geometric discrepancy: 0.0953
- The information below is about IL_4LFB_019
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- IL_31561.1
- Basepair signature
- cWW-L-R-tWH-tWH-L-R-L-cWW
- Number of instances in this motif group
- 1
Unit IDs
6BOK|1|A|G|450
6BOK|1|A|A|451
6BOK|1|A|A|452
6BOK|1|A|A|453
6BOK|1|A|C|454
6BOK|1|A|C|455
*
6BOK|1|A|G|477
6BOK|1|A|A|478
6BOK|1|A|C|479
6BOK|1|A|U|480
6BOK|1|A|G|481
6BOK|1|A|A|482
6BOK|1|A|C|483
Current chains
- Chain A
- 16S ribosomal RNA
Nearby chains
- Chain XA
- 30S ribosomal protein S16
Coloring options: