IL_6BOK_072

3D structure

PDB id

6BOK (explore in PDB, NAKB, or RNA 3D Hub)

Description

E. coli release factor 1 (containing deletion 302-304) bound to the 70S ribosome

Experimental method

X-RAY DIFFRACTION

Resolution

3.55 Å

Loop

Sequence

CGAAU*AUAG

Length

9 nucleotides

Bulged bases

6BOK|1|B|A|283

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_6BOK_072 not in the Motif Atlas

Geometric match to IL_7RQB_057

Geometric discrepancy: 0.1067

The information below is about IL_7RQB_057

Detailed Annotation

tSH-tHW

Broad Annotation

No text annotation

Motif group

IL_04059.1

Basepair signature

cWW-tWH-tHS-cWW

Number of instances in this motif group

13

Unit IDs

6BOK|1|B|C|280
6BOK|1|B|G|281
6BOK|1|B|A|282
6BOK|1|B|A|283
6BOK|1|B|U|284
*
6BOK|1|B|A|357
6BOK|1|B|U|358
6BOK|1|B|A|359
6BOK|1|B|G|360

Current chains

Chain B

23S ribosomal RNA

Nearby chains