IL_6BOK_113
3D structure
- PDB id
- 6BOK (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- E. coli release factor 1 (containing deletion 302-304) bound to the 70S ribosome
- Experimental method
- X-RAY DIFFRACTION
- Resolution
- 3.55 Å
Loop
- Sequence
- UGAAG*CGUAG
- Length
- 10 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_6BOK_113 not in the Motif Atlas
- Homologous match to IL_4WF9_052
- Geometric discrepancy: 0.255
- The information below is about IL_4WF9_052
- Detailed Annotation
- tSH-tHW-tHS
- Broad Annotation
- No text annotation
- Motif group
- IL_05821.1
- Basepair signature
- cWW-tSH-tHW-tHS-cWW
- Number of instances in this motif group
- 17
Unit IDs
6BOK|1|B|U|1357
6BOK|1|B|G|1358
6BOK|1|B|A|1359
6BOK|1|B|A|1360
6BOK|1|B|G|1361
*
6BOK|1|B|C|1370
6BOK|1|B|G|1371
6BOK|1|B|U|1372
6BOK|1|B|A|1373
6BOK|1|B|G|1374
Current chains
- Chain B
- 23S ribosomal RNA
Nearby chains
- Chain E
- 50S ribosomal protein L2
- Chain EA
- 50S ribosomal protein L34
- Chain Y
- 50S ribosomal protein L28
Coloring options: