IL_6BOK_151
3D structure
- PDB id
- 6BOK (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- E. coli release factor 1 (containing deletion 302-304) bound to the 70S ribosome
- Experimental method
- X-RAY DIFFRACTION
- Resolution
- 3.55 Å
Loop
- Sequence
- AUC*GGUUU
- Length
- 8 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_6BOK_151 not in the Motif Atlas
- Homologous match to IL_7A0S_086
- Geometric discrepancy: 0.1179
- The information below is about IL_7A0S_086
- Detailed Annotation
- Major groove minor groove platform with extra cWW
- Broad Annotation
- Major groove minor groove platform with extra cWW
- Motif group
- IL_36931.1
- Basepair signature
- cWW-cSH-cWW-cWW
- Number of instances in this motif group
- 23
Unit IDs
6BOK|1|B|A|2459
6BOK|1|B|U|2460
6BOK|1|B|C|2461
*
6BOK|1|B|G|2489
6BOK|1|B|G|2490
6BOK|1|B|U|2491
6BOK|1|B|U|2492
6BOK|1|B|U|2493
Current chains
- Chain B
- 23S ribosomal RNA
Nearby chains
- Chain GD
- Peptide chain release factor 1
- Chain N
- 50S ribosomal protein L16
- Chain X
- 50S ribosomal protein L27
Coloring options: