IL_6BOK_152
3D structure
- PDB id
- 6BOK (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- E. coli release factor 1 (containing deletion 302-304) bound to the 70S ribosome
- Experimental method
- X-RAY DIFFRACTION
- Resolution
- 3.55 Å
Loop
- Sequence
- CCGAG*CGGCG
- Length
- 10 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_6BOK_152 not in the Motif Atlas
- Homologous match to IL_7RQB_095
- Geometric discrepancy: 0.0768
- The information below is about IL_7RQB_095
- Detailed Annotation
- Triple sheared
- Broad Annotation
- No text annotation
- Motif group
- IL_56467.8
- Basepair signature
- cWW-tSH-tSH-tHS-cWW
- Number of instances in this motif group
- 29
Unit IDs
6BOK|1|B|C|2466
6BOK|1|B|C|2467
6BOK|1|B|G|2468
6BOK|1|B|A|2469
6BOK|1|B|G|2470
*
6BOK|1|B|C|2480
6BOK|1|B|G|2481
6BOK|1|B|G|2482
6BOK|1|B|C|2483
6BOK|1|B|G|2484
Current chains
- Chain B
- 23S ribosomal RNA
Nearby chains
- Chain GA
- 50S ribosomal protein L36
- Chain GD
- Peptide chain release factor 1
- Chain N
- 50S ribosomal protein L16
- Chain W
- 50S ribosomal protein L25
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