IL_6BOK_202
3D structure
- PDB id
- 6BOK (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- E. coli release factor 1 (containing deletion 302-304) bound to the 70S ribosome
- Experimental method
- X-RAY DIFFRACTION
- Resolution
- 3.55 Å
Loop
- Sequence
- GAGUAG*CGCAGAUAC
- Length
- 15 nucleotides
- Bulged bases
- 6BOK|1|DB|A|702
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_6BOK_202 not in the Motif Atlas
- Geometric match to IL_4LFB_031
- Geometric discrepancy: 0.0985
- The information below is about IL_4LFB_031
- Detailed Annotation
- Kink-turn
- Broad Annotation
- No text annotation
- Motif group
- IL_95727.1
- Basepair signature
- cWW-L-tSH-L-tHW-tHS-R-cWW-L
- Number of instances in this motif group
- 1
Unit IDs
6BOK|1|DB|G|683
6BOK|1|DB|A|684
6BOK|1|DB|G|685
6BOK|1|DB|U|686
6BOK|1|DB|A|687
6BOK|1|DB|G|688
*
6BOK|1|DB|C|699
6BOK|1|DB|G|700
6BOK|1|DB|C|701
6BOK|1|DB|A|702
6BOK|1|DB|G|703
6BOK|1|DB|A|704
6BOK|1|DB|U|705
6BOK|1|DB|A|706
6BOK|1|DB|C|707
Current chains
- Chain DB
- 16S ribosomal RNA
Nearby chains
- Chain CD
- 30S ribosomal protein S18
- Chain EB
- Large subunit ribosomal RNA; LSU rRNA
- Chain VC
- 30S ribosomal protein S11
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