IL_6BOK_217
3D structure
- PDB id
- 6BOK (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- E. coli release factor 1 (containing deletion 302-304) bound to the 70S ribosome
- Experimental method
- X-RAY DIFFRACTION
- Resolution
- 3.55 Å
Loop
- Sequence
- GUC*GUC
- Length
- 6 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_6BOK_217 not in the Motif Atlas
- Geometric match to IL_4LFB_047
- Geometric discrepancy: 0.0951
- The information below is about IL_4LFB_047
- Detailed Annotation
- Isolated non-canonical cWW pair
- Broad Annotation
- No text annotation
- Motif group
- IL_68118.1
- Basepair signature
- cWW-cWW-cWW
- Number of instances in this motif group
- 27
Unit IDs
6BOK|1|DB|G|1061
6BOK|1|DB|U|1062
6BOK|1|DB|C|1063
*
6BOK|1|DB|G|1193
6BOK|1|DB|U|1194
6BOK|1|DB|C|1195
Current chains
- Chain DB
- 16S ribosomal RNA
Nearby chains
- Chain HD
- Peptide chain release factor 1
- Chain NC
- 30S ribosomal protein S3
- Chain PC
- 30S ribosomal protein S5
- Chain TC
- 30S ribosomal protein S9
- Chain UC
- 30S ribosomal protein S10
- Chain YC
- 30S ribosomal protein S14 type Z
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