IL_6BOK_218
3D structure
- PDB id
- 6BOK (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- E. coli release factor 1 (containing deletion 302-304) bound to the 70S ribosome
- Experimental method
- X-RAY DIFFRACTION
- Resolution
- 3.55 Å
Loop
- Sequence
- GUUGC*GCACUC
- Length
- 11 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_6BOK_218 not in the Motif Atlas
- Geometric match to IL_5J7L_051
- Geometric discrepancy: 0.2264
- The information below is about IL_5J7L_051
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- IL_06691.1
- Basepair signature
- cWW-cWS-L-R-L-R-cWW-L
- Number of instances in this motif group
- 2
Unit IDs
6BOK|1|DB|G|1124
6BOK|1|DB|U|1125
6BOK|1|DB|U|1126
6BOK|1|DB|G|1127
6BOK|1|DB|C|1128
*
6BOK|1|DB|G|1144
6BOK|1|DB|C|1145
6BOK|1|DB|A|1146
6BOK|1|DB|C|1147
6BOK|1|DB|U|1148
6BOK|1|DB|C|1149
Current chains
- Chain DB
- 16S ribosomal RNA
Nearby chains
- Chain TC
- 30S ribosomal protein S9
- Chain UC
- 30S ribosomal protein S10
Coloring options: