IL_6BOK_222
3D structure
- PDB id
- 6BOK (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- E. coli release factor 1 (containing deletion 302-304) bound to the 70S ribosome
- Experimental method
- X-RAY DIFFRACTION
- Resolution
- 3.55 Å
Loop
- Sequence
- GAUG*CUAAUC
- Length
- 10 nucleotides
- Bulged bases
- 6BOK|1|DB|U|1257, 6BOK|1|DB|A|1280, 6BOK|1|DB|U|1281
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_6BOK_222 not in the Motif Atlas
- Geometric match to IL_4LFB_052
- Geometric discrepancy: 0.1621
- The information below is about IL_4LFB_052
- Detailed Annotation
- 180 degree turn
- Broad Annotation
- No text annotation
- Motif group
- IL_11344.2
- Basepair signature
- cWW-cSS-L-cWW
- Number of instances in this motif group
- 2
Unit IDs
6BOK|1|DB|G|1255
6BOK|1|DB|A|1256
6BOK|1|DB|U|1257
6BOK|1|DB|G|1258
*
6BOK|1|DB|C|1277
6BOK|1|DB|U|1278
6BOK|1|DB|A|1279
6BOK|1|DB|A|1280
6BOK|1|DB|U|1281
6BOK|1|DB|C|1282
Current chains
- Chain DB
- 16S ribosomal RNA
Nearby chains
- Chain NC
- 30S ribosomal protein S3
- Chain TC
- 30S ribosomal protein S9
- Chain UC
- 30S ribosomal protein S10
- Chain YC
- 30S ribosomal protein S14 type Z
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