IL_6BOK_367
3D structure
- PDB id
- 6BOK (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- E. coli release factor 1 (containing deletion 302-304) bound to the 70S ribosome
- Experimental method
- X-RAY DIFFRACTION
- Resolution
- 3.55 Å
Loop
- Sequence
- CGCUGAC*GGUGGAG
- Length
- 14 nucleotides
- Bulged bases
- 6BOK|1|EB|G|932
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_6BOK_367 not in the Motif Atlas
- Homologous match to IL_9DFE_024
- Geometric discrepancy: 0.1116
- The information below is about IL_9DFE_024
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- IL_68243.1
- Basepair signature
- cWW-L-cWW-cWW-R-L-tHS-cWW
- Number of instances in this motif group
- 1
Unit IDs
6BOK|1|EB|C|844
6BOK|1|EB|G|845
6BOK|1|EB|C|846
6BOK|1|EB|U|847
6BOK|1|EB|G|848
6BOK|1|EB|A|849
6BOK|1|EB|C|850
*
6BOK|1|EB|G|928
6BOK|1|EB|G|929
6BOK|1|EB|U|930
6BOK|1|EB|G|931
6BOK|1|EB|G|932
6BOK|1|EB|A|933
6BOK|1|EB|G|934
Current chains
- Chain EB
- 23S ribosomal RNA
Nearby chains
- Chain DC
- 50S ribosomal protein L30
- Chain M
- 50S ribosomal protein L15
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