IL_6BUW_367

3D structure

PDB id

6BUW (explore in PDB, NAKB, or RNA 3D Hub)

Description

Thermus thermophilus 70S complex containing 16S G299A ram mutation and empty A site.

Experimental method

X-RAY DIFFRACTION

Resolution

3.5 Å

Loop

Sequence

CGGG*UCAG

Length

8 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_6BUW_367 not in the Motif Atlas

Geometric match to IL_7LYF_005

Geometric discrepancy: 0.2335

The information below is about IL_7LYF_005

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

IL_25872.1

Basepair signature

cWW-cWW-cWH-cWW

Number of instances in this motif group

7

Unit IDs

6BUW|1|XA|C|67
6BUW|1|XA|G|68
6BUW|1|XA|G|69
6BUW|1|XA|G|73
*
6BUW|1|XA|U|97
6BUW|1|XA|C|99
6BUW|1|XA|A|101
6BUW|1|XA|G|102

Current chains

Chain XA

16S rRNA

Nearby chains

Chain XT

30S ribosomal protein S20