IL_6BY1_103

3D structure

PDB id

6BY1 (explore in PDB, NAKB, or RNA 3D Hub)

Description

E. coli pH03H9 complex

Experimental method

X-RAY DIFFRACTION

Resolution

3.94 Å

Loop

Sequence

GGG*UU

Length

5 nucleotides

Bulged bases

6BY1|1|BA|G|926

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_6BY1_103 not in the Motif Atlas

Homologous match to IL_6CZR_148

Geometric discrepancy: 0.1585

The information below is about IL_6CZR_148

Detailed Annotation

Single bulged G

Broad Annotation

No text annotation

Motif group

IL_00225.12

Basepair signature

cWW-L-cWW

Number of instances in this motif group

52

Unit IDs

6BY1|1|BA|G|925
6BY1|1|BA|G|926
6BY1|1|BA|G|927
*
6BY1|1|BA|U|1390
6BY1|1|BA|U|1391

Current chains

Chain BA

16S ribosomal RNA

Nearby chains

Chain BX

Messenger RNA