3D structure

PDB id
6BY1 (explore in PDB, NAKB, or RNA 3D Hub)
Description
E. coli pH03H9 complex
Experimental method
X-RAY DIFFRACTION
Resolution
3.94 Å

Loop

Sequence
AUACAAAG*CAUAAAGU
Length
16 nucleotides
Bulged bases
6BY1|1|BA|U|1286
QA status
Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.
R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
R3DMCS Rfam
Detailed Annotation
No text annotation
Broad Annotation
No text annotation
Motif group
Not in a motif group
Basepair signature
Not available
Number of instances in this motif group
0

Unit IDs

6BY1|1|BA|A|1246
6BY1|1|BA|U|1247
6BY1|1|BA|A|1248
6BY1|1|BA|C|1249
6BY1|1|BA|A|1250
6BY1|1|BA|A|1251
6BY1|1|BA|A|1252
6BY1|1|BA|G|1253
*
6BY1|1|BA|C|1284
6BY1|1|BA|A|1285
6BY1|1|BA|U|1286
6BY1|1|BA|A|1287
6BY1|1|BA|A|1288
6BY1|1|BA|A|1289
6BY1|1|BA|G|1290
6BY1|1|BA|U|1291

Current chains

Chain BA
16S ribosomal RNA

Nearby chains

Chain BG
30S ribosomal protein S7
Chain BI
30S ribosomal protein S9
Chain BJ
30S ribosomal protein S10
Chain BN
30S ribosomal protein S14

Coloring options:

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