IL_6BY1_194

3D structure

PDB id

6BY1 (explore in PDB, NAKB, or RNA 3D Hub)

Description

E. coli pH03H9 complex

Experimental method

X-RAY DIFFRACTION

Resolution

3.94 Å

Loop

Sequence

GC*GAU

Length

5 nucleotides

Bulged bases

6BY1|1|CA|A|1981

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_6BY1_194 not in the Motif Atlas

Homologous match to IL_7A0S_064

Geometric discrepancy: 0.128

The information below is about IL_7A0S_064

Detailed Annotation

Single bulged A

Broad Annotation

No text annotation

Motif group

IL_14190.1

Basepair signature

cWW-L-cWW

Number of instances in this motif group

134

Unit IDs

6BY1|1|CA|G|1770
6BY1|1|CA|C|1771
*
6BY1|1|CA|G|1980
6BY1|1|CA|A|1981
6BY1|1|CA|U|1982

Current chains

Chain CA

23S ribosomal RNA

Nearby chains